Slot: scaf_powsum
Powersum of all scaffolds is the same as logsum except that it uses the sum of (length*(length^P)) for some power P (default P=0.25).
URI: emi:scaf_powsum Alias: scaf_powsum
Inheritance
- metagenome_assembly_parameter
- scaf_powsum
Applicable Classes
| Name | Description | Modifies Slot |
|---|---|---|
| MetagenomeAssembly | A workflow execution activity that converts sequencing reads into an assemble... | no |
| MetatranscriptomeAssembly | no |
Properties
- Range: Float
Identifier and Mapping Information
Schema Source
- from schema: https://www.earthmetabolome.org/emi-ontology-linkml/
Mappings
| Mapping Type | Mapped Value |
|---|---|
| self | emi:scaf_powsum |
| native | emi:scaf_powsum |
LinkML Source
name: scaf_powsum
description: Powersum of all scaffolds is the same as logsum except that it uses the
sum of (length*(length^P)) for some power P (default P=0.25).
from_schema: https://www.earthmetabolome.org/emi-ontology-linkml/
rank: 1000
is_a: metagenome_assembly_parameter
alias: scaf_powsum
domain_of:
- MetagenomeAssembly
- MetatranscriptomeAssembly
range: float