Slot: scaf_pct_gt50k

Total sequence size percentage of scaffolds greater than 50 KB.

URI: emi:scaf_pct_gt50k Alias: scaf_pct_gt50k

Inheritance

• metagenome_assembly_parameter
  • scaf_pct_gt50k

Applicable Classes

Name	Description	Modifies Slot
MetagenomeAssembly	A workflow execution activity that converts sequencing reads into an assemble...	no
MetatranscriptomeAssembly		no

Properties

• Range: Float

Identifier and Mapping Information

Schema Source

• from schema: https://www.earthmetabolome.org/emi-ontology-linkml/

Mappings

Mapping Type	Mapped Value
self	emi:scaf_pct_gt50k
native	emi:scaf_pct_gt50k

LinkML Source

name: scaf_pct_gt50k
description: Total sequence size percentage of scaffolds greater than 50 KB.
from_schema: https://www.earthmetabolome.org/emi-ontology-linkml/
rank: 1000
is_a: metagenome_assembly_parameter
alias: scaf_pct_gt50k
domain_of:
- MetagenomeAssembly
- MetatranscriptomeAssembly
range: float