Slot: insdc_biosample_identifiers

identifiers for corresponding sample in INSDC

URI: emi:insdc_biosample_identifiers Alias: insdc_biosample_identifiers

Inheritance

• alternative_identifiers
  • external_database_identifiers
    • biosample_identifiers
      • insdc_biosample_identifiers [ insdc_identifiers]

Applicable Classes

Name	Description	Modifies Slot
Biosample	Biological source material which can be characterized by an experiment	no

Properties

• Range: ExternalIdentifier

• Multivalued: True

• Regex pattern: ^biosample:SAM[NED]([A-Z])?[0-9]+$

Aliases

• EBI biosample identifiers
• NCBI biosample identifiers
• DDBJ biosample identifiers

Examples

Value
biosample:SAMEA5989477
biosample:SAMD00212331

See Also

• https://github.com/bioregistry/bioregistry/issues/108
• https://www.ebi.ac.uk/biosamples/
• https://www.ncbi.nlm.nih.gov/biosample
• https://www.ddbj.nig.ac.jp/biosample/index-e.html

Identifier and Mapping Information

Schema Source

• from schema: https://www.earthmetabolome.org/emi-ontology-linkml/

Mappings

Mapping Type	Mapped Value
self	emi:insdc_biosample_identifiers
native	emi:insdc_biosample_identifiers

LinkML Source

name: insdc_biosample_identifiers
description: identifiers for corresponding sample in INSDC
examples:
- value: biosample:SAMEA5989477
- value: biosample:SAMD00212331
  description: I13_N_5-10 sample from Soil fungal diversity along elevational gradients
from_schema: https://www.earthmetabolome.org/emi-ontology-linkml/
see_also:
- https://github.com/bioregistry/bioregistry/issues/108
- https://www.ebi.ac.uk/biosamples/
- https://www.ncbi.nlm.nih.gov/biosample
- https://www.ddbj.nig.ac.jp/biosample/index-e.html
aliases:
- EBI biosample identifiers
- NCBI biosample identifiers
- DDBJ biosample identifiers
rank: 1000
is_a: biosample_identifiers
mixins:
- insdc_identifiers
alias: insdc_biosample_identifiers
domain_of:
- Biosample
range: external_identifier
multivalued: true
pattern: ^biosample:SAM[NED]([A-Z])?[0-9]+$