Slot: contigs

The sum of the (length*log(length)) of all contigs, times some constant. Increase the contiguity, the score will increase

URI: emi:contigs Alias: contigs

Inheritance

• metagenome_assembly_parameter
  • contigs

Applicable Classes

Name	Description	Modifies Slot
MetagenomeAssembly	A workflow execution activity that converts sequencing reads into an assemble...	no
MetatranscriptomeAssembly		no

Properties

• Range: Float

Identifier and Mapping Information

Schema Source

• from schema: https://www.earthmetabolome.org/emi-ontology-linkml/

Mappings

Mapping Type	Mapped Value
self	emi:contigs
native	emi:contigs

LinkML Source

name: contigs
description: The sum of the (length*log(length)) of all contigs, times some constant.  Increase
  the contiguity, the score will increase
from_schema: https://www.earthmetabolome.org/emi-ontology-linkml/
rank: 1000
is_a: metagenome_assembly_parameter
alias: contigs
domain_of:
- MetagenomeAssembly
- MetatranscriptomeAssembly
range: float