Skip to content

Slot: contamination

Estimate of the completeness of the metagenome-assembled genome, estimated by a tool like CheckM.

URI: emi:contamination Alias: contamination

Applicable Classes

Name Description Modifies Slot
EukEval This class contains information pertaining to evaluating if a Metagenome-Asse... no
MagBin no

Properties

  • Range: Float

  • Minimum Value: 0

Identifier and Mapping Information

Schema Source

  • from schema: https://www.earthmetabolome.org/emi-ontology-linkml/

Mappings

Mapping Type Mapped Value
self emi:contamination
native emi:contamination

LinkML Source

name: contamination
description: Estimate of the completeness of the metagenome-assembled genome, estimated
  by a tool like CheckM.
from_schema: https://www.earthmetabolome.org/emi-ontology-linkml/
rank: 1000
alias: contamination
domain_of:
- EukEval
- MagBin
range: float
minimum_value: 0