Slot: target subfragment (target_subfragment)

Name of subfragment of a gene or locus. Important to e.g. identify special regions on marker genes like V6 on 16S rRNA

URI: MIXS:0000045 Alias: target_subfragment

Inheritance

• sequencing_field
  • target_subfragment

Applicable Classes

Name	Description	Modifies Slot
NucleotideSequencing	A DataGeneration in which the sequence of DNA or RNA molecules is generated	no

Properties

• Range: TextValue

Aliases

• target subfragment

Examples

Value
V6, V9, ITS

Identifier and Mapping Information

Annotations

property	value
expected_value	gene fragment name

Schema Source

• from schema: https://www.earthmetabolome.org/emi-ontology-linkml/

Mappings

Mapping Type	Mapped Value
self	MIXS:0000045
native	emi:target_subfragment

LinkML Source

name: target_subfragment
annotations:
  expected_value:
    tag: expected_value
    value: gene fragment name
description: Name of subfragment of a gene or locus. Important to e.g. identify special
  regions on marker genes like V6 on 16S rRNA
title: target subfragment
examples:
- value: V6, V9, ITS
from_schema: https://www.earthmetabolome.org/emi-ontology-linkml/
aliases:
- target subfragment
rank: 1000
is_a: sequencing field
string_serialization: '{text}'
slot_uri: MIXS:0000045
alias: target_subfragment
domain_of:
- NucleotideSequencing
range: TextValue
multivalued: false