sparql-examples
SPARQL examples for the EMI
View the Project on GitHub
earth-metabolome-initiative/sparql-examples
MetaNetX
Examples
A GEM is primarily a set of reactions: here are all the reaction equations ...@en
Building on example 10. ...in addition reactions are endowed with a directi...@en
For the KEGG compound C01732, retrieve the MNXref identifier, name and refe...@en
Given the protein with UniProt accession number P0ABU7 (Biopolymer transpor...
Given the protein with UniProt accession number P42588 (PAT_ECOLI, putresci...@en
List all GEMs currently in the MetaNetX repository, with their numbers of r...@en
List the external identifiers that correspond to the KEGG reaction R00703 (...@en
Retrieve the MNXref metabolite with name N,N-dimethyl-beta-alanine, togethe...
Retrieve the MNXref reaction identifier, that corresponds to the KEGG react...@en
Retrieve the identifiers for N,N-dimethyl-beta-alanine in external database...@en
Show the reaction equation catalyzed by lactate dehydrogenase (KEGG reactio...@en
Show the reaction equation for ATP synthase (reaction ATPS4m from BiGG). NB...@en
Show the reaction equation for the tartrate/succinate antiporter (rhea:3476...@en